HALO® User Group Meeting: Expanding the Boundaries of Digital Pathology Through AI and Integrations
4 May 2023 | Indica Labs is pleased to announce our Boston HALO® User Group Meeting at Le Méridien Boston Cambridge on May 4 from 1 pm - 6 pm....
Blog
An Interview with Jason Shaw, Software Engineer – Infrastructure, Indica Labs
An interview with Jason Shaw, Software Engineer– Infrastructure, Indica Labs ...
Masterclass Webinar 2: Advanced Techniques and Workflows for Multiplex IHC Analysis using HALO® and HALO AI
25 May 2023 | Following up on our Masterclass Webinar 1 for Multiplex IHC analysis, Masterclass 2 will discuss advanced workflows to help users tackle more challenging brightfield multiplex IHC assays. First, we will demonstrate how advanced cell segmentation and phenotyping options using HALO AI can be combined with the multiplex IHC module to improve image analysis. Two alternative approaches for analyzing multiplex IHC will also be demonstrated including a serial stain workflow to convert brightfield images into...
Masterclass Webinar: Optimizing a 3-plex Multiplex IHC Assay Using Roche Discovery Reagents and HALO® Image Analysis
11 May 2023 | In this 60-minute webinar, we discuss best practices and optimization techniques for advanced quantitative multiplex immunohistochemical (mIHC) image analysis....
HALO®, HALO AI, and HALO Link 3.6 Features and Functionalities
In this blog post, you can learn about some of the new features in these modules, where to find the user guides, tutorial videos, and when to expect to upgrade. ...
3.6 Upgrade request
HALO, HALO AI, and HALO Link 3.6 are now available! If you do not have an active SMS plan but would like to upgrade to 3.6, you will need to purchase SMS coverage for your product license(s). You can do so by clicking the button below. Purchase SMS Coverage /*! elementor - v3.10.0 - 09-01-2023 */ .elementor-heading-title{padding:0;margin:0;line-height:1}.elementor-widget-heading .elementor-heading-title[class*=elementor-size-]>a{color:inherit;font-size:inherit;line-height:inherit}.elementor-widget-heading .elementor-heading-title.elementor-size-small{font-size:15px}.elementor-widget-heading .elementor-heading-title.elementor-size-medium{font-size:19px}.elementor-widget-heading .elementor-heading-title.elementor-size-large{font-size:29px}.elementor-widget-heading .elementor-heading-title.elementor-size-xl{font-size:39px}.elementor-widget-heading .elementor-heading-title.elementor-size-xxl{font-size:59px} How it works: If you have an active Software Maintenance and Support (SMS) plan, you can complete the form below to request...
Getting Started with RNAscope™ Image Analysis in HALO®
28 March 2023 | Join us for this 1-hour webinar to see a live demonstration of RNAscope image analysis using the HALO® platform from Indica Labs. This webinar will demonstrate the basic functionality of HALO’s RNAscope modules for analysis of brightfield and fluorescence images and will discuss available analysis outputs. In addition, select HALO modules that are commonly used with RNAscope image analysis will be demonstrated, and a brief introduction to how HALO AI can advance your RNAscope will be...
HALO® 3.5 Image Reader Update request
HALO® 3.5 UPDATE HALO 3.5.3577.285 which fixes an image reader issue is now available If you have HALO Versions 3.5.3577.214, 3.5.3577.255 or 3.5.3577.265 installed, we recommend that you either update HALO 3.5 or upgrade to 3.6 when it is released in March. How it works: Complete the form below to request your update. Following submission of an update request form, a member of our Technical Solutions Team will reach out via email to advise you of the earliest available installation appointments for your region and...
Announcing the launch of a new Microglial Activation module for fluorescence and an updated brightfield module
In this blog post, you can learn about some of the new features in these modules, where to find the user guides, tutorial videos, and when to expect to upgrade. ...
HALO AP 2.1 Upgrade form
HALO AP® 2.1 is now available! Submit the form below to request your upgrade. /*! elementor - v3.10.0 - 09-01-2023 */ .elementor-heading-title{padding:0;margin:0;line-height:1}.elementor-widget-heading .elementor-heading-title[class*=elementor-size-]>a{color:inherit;font-size:inherit;line-height:inherit}.elementor-widget-heading .elementor-heading-title.elementor-size-small{font-size:15px}.elementor-widget-heading .elementor-heading-title.elementor-size-medium{font-size:19px}.elementor-widget-heading .elementor-heading-title.elementor-size-large{font-size:29px}.elementor-widget-heading .elementor-heading-title.elementor-size-xl{font-size:39px}.elementor-widget-heading .elementor-heading-title.elementor-size-xxl{font-size:59px}How it works: Following submission of an upgrade request form, a member of our Technical Solutions Team will reach out via email to advise you of the earliest available installation appointments for your region and schedule your software upgrade(s) accordingly. [wpforms id="40014" title="false"] Questions?Email support@indicalab.com where your local Applications Scientist and/or Technical Solutions Engineer will be available to answer any questions you may...
HALO AP® 2.1 Features and Functionalities
In this blog post, you can learn about the latest release of HALO AP®, a CE marked, AI powered and pathologist driven image management platform from Indica Labs. We’ll discuss the new features in HALO AP 2.1, where to find training resources and documentation, and how the upgrade will be rolled out. ...
HALO Link POC Request
REQUEST A LIVE HALO LINK DEMONSTRATION If you are interested in a live HALO Link software demonstration, submit the form below. Once your form has been submitted, one of our talented Applications Scientists will reach out to schedule your demo! [wpforms id="40108" title="false"]...
HALO Link Demo Request
REQUEST A LIVE HALO LINK DEMONSTRATION If you are interested in a live HALO Link software demonstration, submit the form below. Once your form has been submitted, one of our talented Applications Scientists will reach out to schedule your demo! [wpforms id="40113" title="false"]...
Transforming Pathology at Nottingham University Hospitals: Implementing Digital Pathology using HALO AP®
2, March, 2023. Learn about transformational change in how pathology services are delivered at Nottingham University Hospitals...
Looking Back: Reviewing 2022 at Indica Labs
Reflecting over the last year, we at Indica Labs would like to express our gratitude to the customers and collaborators who helped fill 2022 with exciting discoveries, events, and partnerships. It is our honor to have played a part in customers’ contributions to scientific fields ranging from oncology to infectious disease, immunology, neurology, and biomaterials. ...
HALO® and HALO Link 3.6 Sneak Peek
2 February 2023 | A new version of HALO® and HALO Link from Indica Labs are coming soon! In this 1-hour webinar, Emily Gamble and Kat Latimer will discuss and demonstrate new features and functionalities in this software release and end with a Q/A session....
An interview with Ghislaine Lioux, Sr. Field Applications Scientist – Indica Labs
An interview with Ghislaine Lioux, Sr. Field Applications Scientist – Indica Labs ...
HALO® User Group Meeting: Harnessing the Power of AI in Digital Pathology
6 December 2022 | Indica Labs is pleased to announce our 8th Annual HALO® User Group Meeting to be held in conjunction with the Digital Pathology & AI Congress in London on Tuesday, 6 December from 12:00 to 16:00. ...
Press Release: Indica Labs and Hamamatsu Photonics K.K. Announce Collaboration to Provide Optimized Integrated Digital Pathology Workflows
Albuquerque, NM and Hamamatsu City, Japan, - 14th October 2022 - Indica Labs, an industry leader in quantitative digital pathology and image management solutions, and Hamamatsu Photonics K.K., a forerunner in whole slide imaging systems, announced an agreement to maintain long-term interoperability between Indica Labs’ HALO AP® software platform and Hamamatsu’s NanoZoomer family of high-speed, high-resolution scanners. ...
Exploring SPIAT for HALO image analysis: An R package for the Spatial Image Analysis of Cells in Tissues
21 November 2022 | Join us for this 1-hour webinar to learn how SPIAT can advance your spatial analyses ...
An interview with Jacob Morris, Software Engineering Supervisor – Infrastructure, Indica Labs
An interview with Jacob Morris, Software Engineering Supervisor – Infrastructure, Indica Labs ...
Multiplexing Demo Request
REQUEST A LIVE HALO® MULTIPLEXING DEMONSTRATION If you are interested in a live HALO® multiplexing demonstration, submit the form below. Once your form has been submitted one of our talented Applications Scientists will reach out to schedule your demo! [wpforms id="36460" title="false"]...
Proof-of-concept Multiplexing
PROOF-OF-CONCEPT MULTIPLEX IMAGE ANALYSIS See HALO® in action on up to three of your images with a free analysis. Click here to view our supported file formats. /*! elementor - v3.6.3 - 12-04-2022 */.elementor-heading-title{padding:0;margin:0;line-height:1}.elementor-widget-heading .elementor-heading-title[class*=elementor-size-]>a{color:inherit;font-size:inherit;line-height:inherit}.elementor-widget-heading .elementor-heading-title.elementor-size-small{font-size:15px}.elementor-widget-heading .elementor-heading-title.elementor-size-medium{font-size:19px}.elementor-widget-heading .elementor-heading-title.elementor-size-large{font-size:29px}.elementor-widget-heading .elementor-heading-title.elementor-size-xl{font-size:39px}.elementor-widget-heading .elementor-heading-title.elementor-size-xxl{font-size:59px} How it works: Submit the form below. An Applications Scientist will respond to your request within one business day. They will inquire about your image analysis goals for each image. Upload 1-3 images to a OneDrive folder location provided by the Applications Scientist. ...
Towards Open Pathology: Facilitating Development of Novel AI-based Tools for Digital Pathology through Collaboration and Integration
16 October 2022 | In this 1-hour workshop, Eric Runde, Chief Operating Officer at Indica Labs, will introduce Indica’s platforms, our collaborative approach to incorporating artificial intelligence (AI) into life science and clinical workflows, and the open pathology tools available to developers and industry partners. Dr. Peter Caie, Principal Scientist of AI Collaborations at Indica Labs, will present case studies of customer collaborations resulting in the development and validation of commercially available and inter-operable AI algorithms addressing customer needs....
Multiplex Immunohistochemical Phenotyping of T cells in Primary Prostate Cancer
20 October 2022 | Join us for this 1-hour webinar to learn about an iterative chromogenic based Serial Stain workflow in HALO®...
Press Release: Leica Biosystems Announces Partnership with Indica Labs to Deliver Integrated Digital Pathology Workflow Solutions for Mutual Customers
Vista, CA - Sep 4, 2022, Leica Biosystems, a cancer diagnostics company and a global leader in workflow solutions, and Indica Labs, the industry-leading provider of computational and image management software in digital pathology, today announced a partnership focused on delivering compatible digital pathology workflow solutions. ...
Press Release: Indica Labs Announces Collaboration with The Industrial Centre for Artificial Intelligence Research in Digital Diagnostics (iCAIRD) for the Development of an AI-based Algorithm for the Automated Reporting of Lymph Node Status in Colon Cancer
Albuquerque, NM, and Glasgow, Scotland, – 30 August, 2022 – Indica Labs, an industry leader in quantitative digital pathology and image management solutions, and The Industrial Centre for Artificial Intelligence Research in Digital Diagnostics (iCAIRD), announced today an agreement to collaborate on the development of an AI-based digital pathology solution for the detection of cancer within lymph nodes from colorectal surgery cases....
HALO Prostate AI – A Tool for Automated Detection and Gleason Grading of Prostate Cancer
05 October 2022 | Join us for this 1-hour webinar to learn how to implement the HALO Prostate AI tool for prostate cancer detection and grading ...
Quantitative Digital Pathology: An Overview of the HALO® Image Analysis Platform
6 October 2022 | Join us for this 1-hour webinar to see a live demonstration of the HALO® image analysis platform, the gold standard analysis platform for quantitative tissue analysis in digital pathology. ...
Using Spatial Biology & Advanced Image Analysis Solutions to Decipher Tumor Microenvironment and the Drivers of Cancer Progression by Mass Spectrometry Imaging (MSI) and Imaging Mass Cytometry (IMC)
22 September 2022 | Join us for this 1-hour webinar and learn how MSI and IMC are advancing spatial biology through integration with other imaging and omic analyses...
Panel discussion: Clustering analysis of highly multiplexed immunofluorescence assays analyzed with the HALO® image analysis platform
13 September 2022 | Join us for this 1.5-hour panel discussion on high dimensional clustering to learn about options for performing clustering analysis and for visualizing high dimensional HALO® Highplex FL data, such as UMAP and t-SNE....
Press Release: Deep Bio successfully integrates DeepDx® Prostate algorithm into HALO AP® platform from Indica Labs
Seoul, South Korea, and Albuquerque, NM – August 9, 2022 – Deep Bio, a company concentrating on SaMD (Software as a Medical Device) for digital pathology, is offering clinically validated, AI-based DeepDx® algorithms, and Indica Labs, a leading provider of computational pathology software and services, are excited to announce the successful integration of the DeepDx® Prostate algorithm into the HALO AP® platform from Indica Labs. ...
HALO Prostate AI
HALO Prostate AI, from Indica Labs, is a CE-IVD certified deep learning based screening tool designed to assist pathologists in the identification and grading of prostate cancer in core needle biopsies. ...
New Microglial Activation modules are now available!
New Microglial Activation modules are now available! Submit the form below to request your upgrade. How it works: Following submission of an upgrade request form, a member of our Technical Solutions Team will reach out via email to advise you of the earliest available installation appointments for your region and schedule your software upgrade(s) accordingly. [wpforms id="35906" title="false"] Questions?Email support@indicalab.com where your local Applications Scientist and/or Technical Solutions Engineer will be available to answer any questions you may have on these releases. Want to learn more about our newly released Microglial...
Masterclass Webinar: Neurobiology Image Analysis with HALO and HALO AI
29 September 2022 | Join us for this 1-hour webinar for a live demonstration of neurobiology image analysis using HALO® and HALO AI™. Dr. Levi Maston will demonstrate the recently released Microglial Activation modules and the Object Colocalization modules for BF and FL analysis in HALO....
HALO®, HALO AI™, and HALO Link™ 3.5 Features and Functionalities
In this blog post, you can learn about some of the new features in the 3.5 release, when to expect your opportunity to upgrade, and where to find user guides, release notes, and tutorial videos. ...
3.5 Upgrade request
HALO, HALO AI, and HALO Link 3.5 are now available! If you do not have an active SMS plan but would like to upgrade to 3.5, you will need to purchase SMS coverage for your product license(s). You can do so by clicking the button below. Purchase SMS Coverage How it works: If you have an active Software Maintenance and Support (SMS) plan, you can complete the form below to request your upgrade. Following submission of an upgrade request form, a member of our Technical...
Announcing the Object Colocalization 2.1 modules for BF and FL
In this blog post, you can learn about some of the new features in these modules, where to find the user guides, tutorial videos, and when to expect to upgrade. ...
Object Colocalization modules 2.1 for BF and FL Upgrade form
Object Colocalization modules 2.1 for BF and FL are now available! Submit the form below to request your upgrade. How it works: Following submission of an upgrade request form, a member of our Technical Solutions Team will reach out via email to advise you of the earliest available installation appointments for your region and schedule your software upgrade(s) accordingly. [wpforms id="35654" title="false"] Questions?Email support@indicalab.com where your local Applications Scientist and/or Technical Solutions Engineer will be available to answer any questions you may have on these releases. Want to learn more about...
Press Release: Indica Labs is Awarded Top Workplace Honor by the Albuquerque Journal for the Third Year Running
Albuquerque, NM, 27 June, 2022 – Indica Labs, a leading provider of computational pathology software, is proud to announce that they have been awarded a Top Workplaces™ honor by The Albuquerque Journal for a third year in a row....
HALO AI Demo Request
REQUEST A LIVE HALO AI SOFTWARE DEMONSTRATION If you are interested in a live HALO AI software demonstration, submit the form below. Once your form has been submitted one of our talented Applications Scientists will reach out to schedule your demo! [wpforms id="35428" title="false"]...
Proof-of-concept image analysis with HALO AI™
PROOF-OF-CONCEPT IMAGE ANALYSIS WITH HALO AI™ See HALO AI™ in action on up to three of your images with a free analysis. Click here to view our supported file formats. How it works: Submit the form below. An Applications Scientist will respond to your request within one business day. They will inquire about your image analysis goals for each image. Upload 1-3 images to a OneDrive folder location provided by the Applications Scientist. Arrange a virtual meeting to discuss your image analysis results with an...
HALO and HALO AI 3.5 Sneak Peek
21 July 2022 | A new version of HALO and HALO AI are coming soon! Join this 1-hour webinar presented by Emily Gamble and Donald Allen of the Product Management team who will discuss and demonstrate the new features and functionality of HALO 3.5 and HALO AI 3.5. ...
Press Release: Indica Labs receives top honor in Albuquerque Journal ‘Flying 40’ list of top tech firms in New Mexico
Albuquerque, NM, 13 June, 2022 – Indica Labs, a leading provider of computational pathology software and services is proud to announce today they have received the top award in the Albuquerque Journal ‘Flying 40’ analysis of technology firms in New Mexico. Indica Labs participated in the Flying 40 for the first time in 2022 and received the top honor based on a 323% increase in revenue over the past 5 years. In that same time period, the number of employees...
HALO Link 3.5 Sneak Peek
14 July 2022 | A new version of HALO Link, the collaborative image management platform from Indica Labs is coming soon! In this 1-hour webinar, Kat Latimer of the Product Management team will discuss and demonstrate the new features and functionalities and will end with a Q/A session....
An interview with Rebecca Kicker, Software Engineer on HALO Team
An interview with Rebecca Kicker, Software Engineer on HALO Team ...
Press Release: Indica Labs achieves CE-IVD certification for AI-based Prostate Cancer Detection and Gleason Grading Tool
ALBUQUERQUE, NM – May 24, 2022 – Indica Labs, the leading provider of computational pathology software and services, is excited to announce a CE-IVD Mark for HALO Prostate AI, a deep learning-based screening tool designed to assist pathologists in identifying and grading prostate cancer in core needle biopsies....
HALO AP 2.0 Upgrade form
HALO AP® 2.0 is now available! Submit the form below to request your upgrade. How it works: Following submission of an upgrade request form, a member of our Technical Solutions Team will reach out via email to advise you of the earliest available installation appointments for your region and schedule your software upgrade(s) accordingly. [wpforms id="35076" title="false"] Questions?Email support@indicalab.com where your local Applications Scientist and/or Technical Solutions Engineer will be available to answer any questions you may have on these releases. Want to learn more about HALO AP 2.0?Check out our...
Advanced Multiplex and Spatial Analysis Methods using HALO Data
9 June 2022 | In this 90-minute webinar, Learn about an open-source MIBI image analysis pipeline using HALO data and how to validate a multiplex fluorescence panel for deployment in a clinical setting...
Press Release: Lunaphore and Indica Labs announce partnership to provide complete technology solution for spatial biology and image analysis
LAUSANNE, Switzerland and ALBUQUERQUE, N.M. – May 12, 2022 – 5 pm (CET) | 9 am MDT – Lunaphore, a Swiss life sciences company developing technology to enable spatial biology in every laboratory, and Indica Labs, a leading provider of computational pathology software and services, today announced a partnership to co-market an end-to-end solution that combines Lunaphore’s flagship COMET™ spatial biology platform and Indica’s HALO® and HALO AI™ digital pathology image analysis software....
Masterclass Webinar: Deep Dive into Admin and Metadata Options in HALO Link
30 June 2022 | In this 60-min webinar, Learn how to customize your HALO Link deployment utilizing the system administration options and leverage metadata fields for data integrity. ...
HALO AP 2.0 Features and Functionalities
In this blog post, you can learn about the new features in HALO AP 2.0, the CE marked anatomic pathology case management software from Indica Labs, where to find training resources and documentation, and how the upgrade will be rolled out. ...
HALO Link™ Masterclass Webinar: Making the Most out of a Collaborative Image Database
2 June 2022 | In this 60-min webinar, Learn to maximize utility of the HALO Link collaborative image management platform ...
Maximizing use of HALO® and HALO AI™ for a comprehensive image analysis for HUMAN Brain FFPE Tissue samples in Alzheimer’s Disease
25 May 2022 | In this 60-min webinar, Learn how HALO and HALO AI are advancing neuropathology research at the UW Medicine Biorepository and Integrated Research (BRaIN) laboratory ...
An Interview with Eric Runde, Chief Operating Officer
An expansive interview with Indica Labs' Chief Operating Officer, Eric Runde....
Interested in Quantitative Image Analysis in Oncology?
In this blog post, you can learn about what the team at Indica Labs has planned for the upcoming AACR 2022 conference in New Orleans! From April 10-13, our team will be in booth #1147, and our Applications Scientists will be available to answer any questions you have about how our HALO® software suite can advance your oncology research and can provide you with a demonstration of the latest release of our flagship HALO® image analysis software, our powerful HALO AI™ deep learning add-on, and our HALO Link™ collaborative...
Masterclass Webinar: Optimizing RNAscope Image Analysis
05 May 2022 | In this 60-min webinar, Dr. Ghislaine Lioux will present solutions to common RNAscope image analysis challenges including how to optimize color deconvolution, nuclear segmentation, and how to manage spot clusters...
Announcing the Vacuole Quantification module v3.2
/*! elementor - v3.5.0 - 12-12-2021 */.elementor-widget-image{text-align:center}.elementor-widget-image a{display:inline-block}.elementor-widget-image a img[src$=".svg"]{width:48px}.elementor-widget-image img{vertical-align:middle;display:inline-block} We’re excited to announce the launch of the updated Vacuole Quantification module v3.2! In this blog post, you can learn about some of the new features in this module, where to find the user guide and tutorial video, and when to expect to upgrade. /*! elementor - v3.5.0 - 12-12-2021 */.elementor-heading-title{padding:0;margin:0;line-height:1}.elementor-widget-heading .elementor-heading-title[class*=elementor-size-]>a{color:inherit;font-size:inherit;line-height:inherit}.elementor-widget-heading .elementor-heading-title.elementor-size-small{font-size:15px}.elementor-widget-heading .elementor-heading-title.elementor-size-medium{font-size:19px}.elementor-widget-heading .elementor-heading-title.elementor-size-large{font-size:29px}.elementor-widget-heading .elementor-heading-title.elementor-size-xl{font-size:39px}.elementor-widget-heading .elementor-heading-title.elementor-size-xxl{font-size:59px} What New Features are Included in the Module? This major module update includes the following features: ...
Vacuole Module 3.2 Upgrade form
Vacuole Module 3.2 is now available! Submit the form below to request your upgrade. How it works: Following submission of an upgrade request form, a member of our Technical Solutions Team will reach out via email to advise you of the earliest available installation appointments for your region and schedule your software upgrade(s) accordingly. [wpforms id="34783" title="false"] Questions?Email support@indicalab.com where your local Applications Scientist and/or Technical Solutions Engineer will be available to answer any questions you may have on these releases. Want to learn more about Vacuole module v3.2?Check out...
Whole-slide Quantitative RNAscope Image Analysis: Applications and Methods
20 April 2022 | In this 2-hour event, learn from three experts in RNAscope image analysis with HALO® as they present their scientific research, share RNAscope tips and tricks, and participate in a panel discussion. ...
HALO AP 2.0 Sneak Peek
29 March 2022 | A new version of HALO AP, Indica Labs’ clinical case management software, is coming soon! HALO AP 2.0 reimagines the pathologist’s cockpit with an updated case viewer and several new workflow enhancements. In this hour-long webinar, we will demonstrate these new features and end with a Q&A session. ...
Optimizing quantitative analysis of highly multiplexed CODEX images in HALO
31 March 2022 | In this webinar, Dr. Noemi Kedei, a staff scientist at the Collaborative Protein Technology Resource core of the Center for Cancer Research (CCR) at the National Cancer Institute, will present a comprehensive CODEX workflow, from image acquisition to image processing and HALO image analysis. Dr. Kedei leads the core facility that provides this technology as service to CCR investigators, including project consultation and design, antibody panel customization, tissue staining and imaging, image processing, and...
An Interview with Dr. Anne Hellebust, Director of Product
An Interview with Dr. Anne Hellebust, Director of Product....
Software Maintenance and Support (SMS) Plan Request
Software Maintenance and Support (SMS) Coverage Software Upgrades Newest releases like HALO, HALO AI, and HALO Link 3.6 – which are now being scheduled for install. Plus unlimited access to updates like software patches and bug fixes between major releases. Support World class technical and application support from our Technical Solutions Engineers...
3.4 Upgrade request
HALO, HALO AI, and HALO Link 3.4 are now available! If you do not have an active SMS plan but would like to upgrade to 3.4, you will need to purchase SMS coverage for your product license(s). You can do so by clicking the button below. Purchase SMS Coverage How it works: If you have an active Software Maintenance and Support (SMS) plan, you can complete the form below to request your upgrade. Following submission of an upgrade request form, a member of our Technical...
HALO, HALO AI, and HALO Link 3.4 Features and Functionalities
In this blog post, you can learn about some of new features in each of these releases, where to find user guides, release notes, and tutorial videos, and when to expect to upgrade....
RNAscope common questions, troubleshooting, and tips and tricks
When performing RNAscope image analysis, you can set yourself up for success with a combination of thoughtful experimental design, rigorous assay execution and validation. At Indica Labs, the most common challenges we see in RNAscope image analysis include chromogenic staining that has saturated to black, which causes color deconvolution challenges, loss of nuclear morphology due to over-digestion of tissue, and failing to verify and validate an image analysis solution before scaling up....
Press Release: Indica Labs’ HALO AP® platform achieves CE-IVD certification for use in primary diagnosis
Albuquerque, NM, 10 January, 2022 – Indica Labs, a leading provider of computational pathology software and services, is proud to announce that following ISO13485 certification, HALO AP® has received a CE Mark for use in primary diagnosis within the European Economic Area, Switzerland, and the UK....
Bridge the Gap with Indica Labs’ Pharma Services
At Indica Labs, our Pharma Services team is here to help you extract more data from your biomarker assays with our digital image analysis services. From single biomarker IHC to ISH/FISH and highly multiplexed fluorescence and imaging mass cytometry, we offer quantitative image analysis solutions with our own HALO and HALO AI analysis platforms. With over 150 completed image analysis projects, our team has experience across multiple disease areas, applications, and assay types, including immune phenotyping in tumors, biomarker expression...
Proof-of-concept image analysis
PROOF-OF-CONCEPT IMAGE ANALYSIS See HALO® or HALO AI™ in action on up to three of your images with a free analysis. Click here to view our supported file formats. How it works: Submit the form below. An Applications Scientist will respond to your request within one business day. They will inquire about your image analysis goals for each image. Upload 1-3 images to a OneDrive folder location provided by the Applications Scientist. Arrange a virtual meeting to discuss your image analysis results with an Application...
An Interview with Vlado Ovtcharov, Senior Research Scientist – Artificial Intelligence
Expansive Interview Vlado Ovtcharov: Senior Research Scientist – Artificial Intelligence ...
2021: A Year in Review at Indica Labs
As 2021 draws to a close, the team at Indica Labs would like to take this opportunity to reflect on the year and to thank our customers for their continued support through this second pandemic year. Despite the ongoing challenges that the pandemic presents, we celebrate the achievements of our customers who have published over 250 publications in peer-reviewed journals this year with an impressive average impact factor of 9.12. To learn more about these publications spanning immuno-oncology, oncology, immunology,...
Tumor-specific tumor-resident cytotoxic T cells predict recurrence in stage III melanoma patients treated with adjuvant immunotherapy
20 January 2022 | In this 60-minute webinar, learn how HALO and HALO AI collaborate to perform tissue and cell segmentation, quantification of T-cell subsets in tumor regions, and spatial analysis ....
A Deep Learning Convolutional Neural Network Can Differentiate Between Helicobacter Pylori Gastritis and Autoimmune Gastritis with Results Comparable to Gastrointestinal Pathologists
13 January 2022 | In this 60-minute webinar, researchers and pathologists from the University of New Mexico will discuss their recently published study using the HALO AI™ deep learning convolutional neural network (CNN) to determine whether a CNN can differentiate autoimmune gastritis from Helicobacter pylori gastritis....
2021 Masterclass: HALO AI Deep Dive on the Validation Workflow
16 December 2021 | In this Masterclass webinar we will delve into one of the latest AI tools, the AI validation workflow (available as of the HALO v3.3 release). This tool can be used to answer the question How good is my trained AI network? ...
Using digital pathology to determine the role of tumor-infiltrating B cells in clinical outcome of patients with melanoma
15 December 2021 | This webinar will share an analysis of biomarkers using pre-treatment melanoma samples from the dabrafenib plus trametinib arm of the randomized, Phase III COMBI-v trial using the HALO® image analysis platform combined with gene expression analysis using the Nanostring nCounter technology....
Bench-to-Bedside Transition of Novel HALO® Assays into Clinical Trials with HALO AP®
10 December 2021 | In this 1-hour webinar, featured speakers will demonstrate end-to-end how to develop a quantitative assay in HALO and transition it into clinical trials using HALO AP....
Leveraging the collaborative image management platform, HALO Link, for multi-site image analysis collaborations
03 December 2021 | In this webinar you will learn how the Pharma Services team at Indica Labs uses HALO Link to collaborate with customers, to launch and display image analysis results, and to archive studies...
HALO, HALO AI, and HALO Link 3.4 Sneak Peek
02 December 2021 | New versions of all of the Indica Labs research products are coming soon! HALO, HALO AI, and HALO Link 3.4 each contain performance and workflow enhancements that the Product Management team is eager to share. In this hour-long webinar, we will discuss and demonstrate these brand-new developments, and end with a Q/A session....
2021 Masterclass: Deep Dive into AI-Based Nuclear Segmentation and Phenotyping Part II
04 November 2021 | Following up on our HALO 3.2 Masterclass: Deep Dive into AI-based Nuclear Segmentation and Phenotyping, in this Masterclass webinar with HALO 3.3, we will further delve into options for AI-based nuclear segmentation and phenotyping....
Indica Labs HALO® User Group Meeting: Bench-to-Bedside Workflows for Digital Pathology, Image Analysis and AI
30 November 2021 | Indica Labs is pleased to announce our 7th Annual HALO® User Group Meeting to be held in conjunction with the Digital Pathology & AI Congress in London on 30 Tuesday November from 12:00 to 16:00. A lunch will be provided to all pre-registered attendees....
Adoption of the HALO® Platform at Caris Life Sciences’ High Volume Digital Pathology Laboratory
17 October 2021 | In this one-hour pre-conference workshop, Indica Labs is pleased to host Dr. Matthew Oberley, Executive Medical Director at Caris Life Sciences, who will present a case study on deploying HALO AP® case management software in their high-volume, fully digital, anatomic pathology lab. Dr. Oberley will discuss the challenges and selection criteria that led to the adoption of HALO AP, describe the integration into their laboratory workflows, and, finally, touch on the rollout progress and future plans...
THYROID MALT LYMPHOMA: SELF-HARM TO GAIN POTENTIAL T-CELL HELP
28 October 2021 | The development of extranodal marginal zone lymphoma of mucosa-associated lymphoid tissue (MALT) is driven by chronic inflammatory responses and acquired genetic changes. To investigate its genetic bases, we performed targeted sequencing of 93 genes in 131 MALT lymphomas including 76 from the thyroid. We found frequent deleterious mutations of TET2 (86%), CD274 (53%), TNFRSF14 (53%) and TNFAIP3 (30%) in thyroid MALT lymphoma....
HALO AP 1.3 Sneak Peek
14 October 2021 | The next release of HALO AP®, Indica Labs' state of the art anatomic pathology software, will be available soon. Join us to see all the new features focused on simplifying the transition to digital case review and hear about our recent CE Mark award for use in primary diagnosis. As anatomic pathology labs transition to digital, it's important that their image management software simplifies case review, is compatible with a wide range of scanners and...
Automated detection and quantitation of gastric immune cells in a mouse model of Helicobacter pylori-driven preneoplastic progression
21 October 2021 | Gastric cancer is the fourth-leading cause of cancer death worldwide. About 80% of cases are attributable to infection with the bacterium Helicobacter pylori (Hp). Untreated Hp infection causes lifelong stomach inflammation that does not eradicate the bacterium. In some individuals, stomach inflammation leads to preneoplastic progression, a series of sequential tissue changes including loss of gastric acid-producing parietal cells, metaplasia, dysplasia, and finally cancer....
CD38 in the Prostate Tumor Microenvironment
6 October 2021 | CD38, a druggable ectoenzyme, is involved in the generation of adenosine, which is implicated in tumor immune evasion. Its expression and role in prostate tumor-infiltrating immune cells (TIICs) have not been elucidated. We characterized CD38 expression on prostate cancer (PC) epithelial cells and TIICs and explored the association of this expression with clinical outcomes. RNAseq from 159 patients with metastatic castration-resistant prostate cancer (mCRPC) in the International Stand Up To Cancer/Prostate Cancer Foundation (SU2C/PCF) cohort and 171...
Press Release: Indica Labs earns Work/Life Flexibility award and is named a Top Workplace by The Albuquerque Journal for the second year running
Albuquerque, NM, 2 September, 2021 – Indica Labs, a leading provider of computational pathology software, is proud to announce that they have been awarded a Top Workplaces™ honor by The Albuquerque Journal for a second year in a row. In addition to being a Top Workplace, Indica Labs was the sole recipient of the Life/Work Flexibility award for 2021....
Spatial Biology: Revolutionizing Tissue Imaging and Analysis Using Spatial profiling
23 September 2021 | DigiBase invites you to attend a Spatial Biology webinar symposium to learn from experts in the field on how digital pathology, high-dimensional multiplexing, spatial and AI analytic tools, and spatial transcriptomic technologies are advancing tissue imaging and analysis....
An interview with Charles Habermehl, Software Engineer (Previous Intern)
Q1. As an intern, what projects were you assigned to work on? What skills did you acquire or improve while working on these projects? A1. As an intern I was assigned to work on the Halo Link team. Before working on the Halo Link team I had no experience in Web Development which is the main skill I picked up in my time here so far. To be specific, before I started I did not know JavaScript and am now quite...
An interview with Anas Gauba, Software Engineer (Previous Intern)
Q1. As an intern, what projects were you assigned to work on? What skills did you acquire or improve while working on these projects? A1. As an intern, I worked on the project to build quota-system where the customer can buy some quota whether it be quota for doing analysis, disk storage, etc. I also worked on building a loginAttempt feature where we can track important information such as customers’ ip address and which service they logged in from. The projects...
An interview with Dylan Balata, Software Engineer (Previous Intern)
Q1. As an intern, what projects were you assigned to work on? What skills did you acquire or improve while working on these projects? A1. As an intern I worked on developing ASP.NET Core based infrastructure solutions utilizing https/web socket technology while incorporating native and db interactions. Q2. What do you enjoy most about working at Indica Labs?...
An Interview with Adam Smith, Director of Life Science Applications, North America and Australasia
An Interview with Adam Smith, Director of Life Science Applications, North America and Australasia...
Automated Detection and Gleason Grading of Prostate Cancer in Digital Pathology
8 September 2021 | Digital pathology provides an advantage of automatizing many routine pathological tasks via computational algorithms and tools. The reporting of prostate cases is time-consuming due to a large number of slides per case. Moreover, tumor aggressivity grading (Gleason score) is well known for its subjective nature and high levels of interobserver variability. In this webinar, we will demonstrate a deep learning-based tool developed for the detection of prostate cancer in histological slides (prostate biopsies and prostatectomy...
Press Release: Nottingham University Hospitals NHS Trust selects Indica Labs to deliver their Digital Pathology Solution with HALO AP
Albuquerque, NM, USA and Nottingham, UK, 1 July, 2021 – Following a formal tender process, Nottingham University Hospitals (NUH) NHS Trust today announced the selection of Indica Labs to aid in full digitisation of the pathology workflow. Indica Labs will deliver its leading digital pathology software, HALO AP®, fully integrated with existing hospital systems, alongside multiple Hamamatsu Nanozoomer scanners....
Press Release: Indica Labs and Ibex Partner to Deliver AI-powered Clinical Workflows for Digital Pathology
ALBUQUERQUE, NM and TEL AVIV, Israel – May 20, 2021 – Indica Labs, an industry leader in quantitative digital pathology & image management solutions, and Ibex Medical Analytics, a pioneer in artificial intelligence (AI) based cancer diagnostics, announced an agreement to integrate the Galen™ AI-based cancer diagnostics platform into the HALO AP® digital pathology workflow platform....