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Branch Structure Module

Detect and measure branch-like structures in brightfield images with the HALO® Branch Structure module. This module is ideal for performing structural analysis of branched structures such as retinal vessels and cortical neurons. Gain a deeper understanding of these structures with analysis outputs including branch points, number of end points, total branch area, total branch length, average branch thickness, and tissue area.

Try it out! Click here to initiate your free proof-of-concept HALO image analysis.

File formats supported by the HALO image analysis platform:

  • Non-proprietary (JPG, TIF, OME.TIFF)
  • Nikon (ND2)
  • 3D Histech (MRXS)
  • Akoya (QPTIFF, component TIFF)
  • Olympus / Evident (VSI)
  • Hamamatsu (NDPI, NDPIS)
  • Aperio (SVS, AFI)
  • Zeiss (CZI)
  • Leica (SCN, LIF)
  • Ventana (BIF)
  • Philips (iSyntax, i2Syntax)
  • KFBIO (KFB, KFBF)
  • DICOM (DCM*)
    *whole-slide images

Related HALO Modules

Object Colocalization

Simultaneously analyze up to five chromogenic stains and measure object density, area, diameter, and optical density, as well as colocalizations, if applicable.

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Microglial Activation

Quantify microglial activation based on length and thickness of microglial processes.

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Branch Structure FL

Quantify branch ends, area, length, and more for branched structures such as retinal vessels and cortical neurons in fluorescent images.

Learn More

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