Muscle Fiber FL Quantification
The Muscle Fiber module detects and measures muscle fibers and reports various metrics....
All Applications
FISH-IF Quantification
The ISH Quantification module measures one or two chromogen and/or silver-labeled DNA or RNA ISH probes on a per cell basis and is ideally suited for brightfield single or dual probe RNAscope assays....
ISH-IHC Quantification
The ISH Quantification module measures one or two chromogen and/or silver-labeled DNA or RNA ISH probes on a per cell basis and is ideally suited for brightfield single or dual probe RNAscope assays....
BRANCH STRUCTURE
[vc_row][vc_column][rev_slider alias="branchstructure"][/vc_column][/vc_row][vc_row bg_type="bg_color" ult_hide_row="ult_hide_row_value" ult_hide_row_large_screen="large_screen" ult_hide_row_desktop="desktop"][vc_column][vc_empty_space][vc_column_text] BRANCH STRUCTURE Product Overview The Branch Structure module performs analysis of branch-like structures such as retinal vessels. The module identifies vessels, performs structural analysis, and reports a variety of vascular metrics that are near-impossible to measure manually. In the example shown above, the retinal vascular areas are colored yellow. The vessel skeletons are shown with a thin blue line, and vessel branch points are identified with red dots. the module reports total vessel area, total vessel length, average...
Area Quantification FL
Calculate area, percentage area, and intensity of up to three fluorophores across analysis area. Also calculate colocalization of these dyes....
Area Quantification Brightfield
Seperate up to three stains and calculate area, percentage area, and OD of each stain across analysis area. Also calculate colocalization of these stains....
Object Colocalization
The Object Colocalization module is used to count and measure one or two labeled objects, such as microvessels and plaques, in brightfield histology slides....
Vacuole Quantification
The Vacuole Quantification module is a multi-purpose tool that can be used for quantifying the number and size of white spaces in tissue such as lipids in brown and white adipose tissue, lipid droplets in liver tissue (steatosis), and alveoli area in lung. ...
Multiplex IHC
The Multiplex IHC module separates up to five stains simultaneously within any cellular compartment (nucleus, cytoplasm or membrane)....
Highplex FL
The High-Plex FL module allows for simultaneous analysis of up to 8 immunofluorescently-labeled markers in any cellular compartment - nucleus, cytoplasm, and/or membrane. ...
Spatial Analysis
The Spatial Analysis module is a suite of tools for analyzing proximity and relative spatial distribution of objects, cells, and/or features across single tissues or serial sections. This module is of particular importance for those conducting immuno-oncology research. ...
Membrane FL
The Membrane FL Quantification module measures fluorescently-labeled membranous markers on a cell-by-cell basis and scores cells according to membrane marker intensity. ...
ISH Quantification
The ISH Quantification module measures one or two chromogen and/or silver-labeled DNA or RNA ISH probes on a per cell basis and is ideally suited for brightfield single or dual probe RNAscope assays....
Islet Quantification
Measures islets and classifies islet cells by nuclear and cytoplasmic positivity for up to two stains....
Muscle Fiber Quantification
The Muscle Fiber module detects and measures muscle fibers and reports various metrics....
Multiplex FISH
Indica Labs’ Multiplex FISH module measures up to four DNA or RNA FISH probes on a per cell basis and is ideally suited for Fluorescent RNAscope assays....
Object Colocalization FL
Identify and count multiple object types and measure object colocalization....
Membrane IHC
Quantify membranous immunohistochemical markers on a cell-by-cell basis....
Microglial Activation Quantification
Measures microglial cell activation. Counts activated/inactivated cells, reports process length, thickness, and branching....
Cytonuclear IHC
Measures single or double stain IHC positivity cell-by-cell in cytoplasm, nucleus, or both....
Axon Quantification
Measures and counts nerve axons and reports axon diameters and myelin wall thickness....
Cytonuclear FL
Cytonuclear FL measures the immunofluorescent positivity of an unlimited number of fluorescent markers in the nucleus or cytoplasm and reports the number of cells that are positive for each marker, the intensity score for each cell (0, 1+, 2+, 3+), and colocalization of different marker combinations. Optionally, the tool can output the complete table of cell data including individual cell sizes and intensity measurements for each dye in each cellular compartment. In the dual stained mouse pancreas shown above, the...
Break-Apart & Fusion FISH
Automatically detect translocation by counting dual fusion probes and identifying fused pairs....
Amplification & Deletion FISH
Quantitate gene amplification and deletion by counting dual probes and probe ratios....
Serial Registration Analysis
Analyze serially stained tissue sections or a single tissue section which has been stained, stripped and re-stained for multiple markers....
Analysis Cluster
A high-throughput processing engine designed for a cluster of high-end computational servers....
Islet Quantification FL
Count and measure pancreatic islets and classify cells within each islet....
Tissue Classifier
State-of-the-art pattern recognition module for automatic tissue classification and region-of-interest selection...
Tissue Microarray (TMA)
Automated quantification of TMAs in both brightfield and immunofluorescence....