Indica
Backed by cutting edge technology, an uncompromising focus on ease-of-use and dedicated customer service, Indica Labs’ software and services are being used to make vital discoveries in pathology labs and research organizations around the world.

Discover HALO Modules & Add-ons

Click on the links below to explore a few of our most popular HALO modules and workflow add-ons. Use the category filters or click the orange 'Load More' button at the bottom of the list to see additional module options.

Highplex FL
Quantify expression of an unlimited number of biomarkers in any cellular compartment - membrane, nucleus or cytoplasm.
Highplex FL
Multiplex IHC
Quantify expression of up to five brightfield stains in any cellular compartment - membrane, nucleus or cytoplasm.
Multiplex IHC
FREE IMAGE ANALYSIS
Click here to initiate your free proof-of-concept HALO image analysis.
FREE IMAGE ANALYSIS
Tissue Classifier Add-on
Separate multiple tissue classes across a tissue using a learn-by-example approach. Can be used in conjuction with all other modules (fluorescent and brightfield) to select specific tissue classes for further analysis.
Tissue Classifier Add-on
Spatial Analysis
Plot cells and objects from one or more images and perform nearest neighbor analysis, proximity analysis, and tumor infiltration analysis.
Spatial Analysis
ISH
Quantify spot number, optical density and co-expression of one or two brightfield RNA or DNA probes on a per cell basis. Includes support for brightfield RNAscope® assays.
ISH (RNAScope®)
ISH-IHC
Quantify IHC positivity and spot number, optical density and co-expression of one or two brightfield RNA or DNA probes on a per cell basis. Includes support for brightfield RNAscope® assays.
ISH-IHC (RNAScope®)
FISH-IF
Quantify an unlimited number of fluorescent RNA/DNA probes and IF protein biomarkers on a per cell basis. Includes support for fluorescent RNAscope® assays.
FISH-IF (RNAScope®)
Multiplex FISH
Quantify number, intensity and co-expression of an unlimited number of fluorescently labeled RNA or DNA probes on a per cell basis. Includes support for fluorescent RNAscope ® assays.
Multiplex FISH (RNAScope®)
Tissue Microarray (TMA) Add-on
Module to assist in the segmentation of TMA spots for further analysis.
Tissue Microarray (TMA) Add-on
Area Quantification
Deconvolve up to five colors in brightfield and measure positive area and average optical density for each stain and stain colocalization (where applicable).
Area Quantification
Cytonuclear IHC
Quantify expression of up to four brightfield cytoplasmic/nuclear markers on a per cell basis and bin cells according to intensity (1+, 2+ and 3+).
Cytonuclear IHC
Area Quantification FL
Measure the positive area, average intensity and dye colocalization (where applicable) of an unlimited number of fluorescent dyes.
Area Quantification FL
Cytonuclear FL
Quantify expression of an unlimited number of fluorescently labeled cytoplasmic/nuclear markers on a per cell basis and bin cells according to intensity (1+, 2+ and 3+).
Cytonuclear FL
Membrane IHC
Quantify intensity of brightfield membrane markers on a per cell basis and bin cells according to intensity (0, 1+, 2+, 3+).
Membrane IHC
Membrane FL
Quantify intensity of fluorescently-labeled membrane markers on a per cell basis and bin cells according to intensity (0, 1+, 2+, 3+).
Membrane FL
Object Colocalization
Count one or two objects and measure the object area, diameter, stain intensity, and colocalization (where applicable). Microvessel and amyloid plaque quantification are most common applications.
Object Colocalization
Vacuole
Quantifies vacuole area, diameter, perimeter, and number of vacuoles per region of interest. Measures steatosis in kidney, lipid droplets in adipose tissue, and alveolar area in lung tissue.
Vacuole
Object Colocalization FL
Count one or two fluorescently labeled objects and measures the object area, diameter, stain intensity, and colocalization (where applicable). Microvessel and amyloid plaque quantification are most common applications.
Object Colocalization FL
Muscle Fiber
Quantifies area, diameter, and perimeter of muscle fibers stained with laminin or other fiber membrane stain.
Muscle Fiber
Muscle Fiber FL
Quantifies area, diameter, and perimeter of fluorescently-labelled muscle fibers stained with membrane markers, such as laminin.
Muscle Fiber FL
Branch Structure
Quantify branched objects such as capillaries in brightfield and fluorescence.
Branch Structure
Islet IHC
Count pancreatic islets, quantify number of alpha and beta cells in each islet, and determine area of islets stained with insulin and glucagon or other islet-specific stains
Islet IHC
Islet FL
Count pancreatic islets fluorescently-labeled with up to three dyes, quantify number of dye positive cells per islet and area of dye positivity per islet.
Islet FL
Microglial Activation
Quantify microglial activation based on length and thickness of microglial processes.
Microglial Activation
Amplification & Deletion FISH
Quantify up to two fluorescently-labeled DNA probes to measure amplification or deletion.
Amplification & Deletion FISH
Break Apart Fusion FISH
Meaure gene rearrangements detected using break-apart fusion probes.
Break Apart Fusion FISH
Serial Registration Analysis Add-on
Analyze serially stained tissue sections stained with different markers or a single tissue section which has been stained, stripped and re-stained for multiple markers.
Serial Section Analysis Add-on
Analysis Cluster Add-on
Designed for organization with large volume of slides or users, analysis clusters speed up analysis by facilitating simultaneous processing of multiple images in parallel.
Analysis Cluster Add-on
Axon
Quantify axons in cross sections. Calculate axon area, myelin area, myelin thickness, inner and outer axon diameter, and G-ratio.
Axon