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Backed by cutting edge technology, an uncompromising focus on ease-of-use and dedicated customer service, Indica Labs’ software and services are being used to make vital discoveries in pathology labs and research organizations around the world. Discover how our solutions can help you.

Backed by cutting edge technology, an uncompromising focus on ease-of-use and dedicated customer service, Indica Labs’ software and services are being used to make vital discoveries in pathology labs and research organizations around the world. Discover how our solutions can help you.

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HALO® Image Analysis

With uncompromising ease-of-use and flexibility, the HALO IMAGE ANALYSIS PLATFORM can adapt to any image analysis application.

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HALO AI™ Deep Learning

HALO AI, the first of its kind intuitive interface for deep learning in digital pathology, is putting the power of AI in the hands of the pathologist.

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HALO Link™ Image Management

Share images and analysis data with remote collaborators using HALO LINK, our browser-based image management system.

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Pharma Services

If you are overwhelmed with your image analysis workload or need help with more complex analysis, our PHARMA SERVICES team can help.

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HALO AP® Clinical Workflow

The HALO AP platform brings case-centric automation, collaboration and quantification to your Anatomic Pathology lab.

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Explore our Integrated Platforms

Click play to learn how all of our HALO products fit together to offer an end-to-end Digital Pathology workflow from bench to bedside!

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Application Notes & White Papers

Follow the links below to explore a few of our most popular applications.

HALO Application Note

Measure immune cell density and spatial distance to tumor cells within the tumor and invasive margin

Using our multiplex IHC module, we quantify immune cells and tumor cell markers across whole slide images.  The tissue classifier add-on is employed to segment tumor and stroma and the spatial analysis module is used for proximity and invasive margin analysis.  

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HALO Application Note

Quantify Single and Multiplexed RNAscope® probes across whole slide tissues

Using our ISH module for brightfield and our FISH module for fluorescence, we demonstrate how to quantify ISH signal from RNAScope® assays on a per cell or per unit area basis and output an overall expression score based on ACD Bio’s recommended scoring guidelines.  

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HALO AI White Paper

Moving deep learning out of the computer lab and into the hands of the pathologist with HALO AI™

If you’ve been to any digital pathology meetings recently you have heard artificial intelligence or deep learning mentioned at least once. In this white paper, we will introduce some of the basics about this emerging technology and explain how HALO AI™  is making artificial intelligence accessible to the pathology community.

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Browse all HALO modules & add-ons  >>

Read what our customers are publishing

Our customers are making vital discoveries in oncology, neuroscience, infectious disease, and diabetes research.  Check out some of the research our customers are publishing using the HALO Image Analysis Platform and Indica analysis modules.

Read High Impact Publications

Click the button above to check out the latest high-impact publications where HALO image analysis was used. 

Spotlight on RNAscope™ Image Analysis

Follow the links below to learn how our customers are using HALO® RNAscope modules for quantitative image analysis of whole-slide tissues examining RNA target expression and protein co-detection.

RNAscope Webinar

Whole-slide Quantitative RNAscope Image Analysis: Applications and Methods

Join us for this 2-hour event, where three experts in RNAscope quantification across whole slide tissues present their research using the HALO image analysis platform from Indica Labs.

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RNASCOPE PUBLICATIONS

RNASCOPE PUBLICATIONS WITH THE HALO® IMAGE ANALYSIS PLATFORM

Learn about the latest high-impact RNAscope publications using the ISH, FISH, ISH-IHC, and FISH-IF modules across immunology and infectious disease, metabolism, neurobiology, and oncology and immuno-oncology.

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RNASCOPE IMAGE ANALYSIS 

QUANTITATIVE RNASCOPE IMAGE ANALYSIS GUIDE

This white paper provides an example of exemplary assays, introduces HALO image analysis solutions, discusses experimental considerations, addresses common challenges, and answers frequently asked questions.

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RNASCOPE APPLICATIONS

CHARACTERIZE IMMUNE PHENOTYPES WITH 12-PLEX RNASCOPE HIPLEX V2 IMAGE ANALYSIS

Read the latest Application Note in collaboration with ACD, on HiPlex v2 analysis that supports up to 12-48 targets depending on fixation conditions with the FISH module of HALO.

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CUSTOMER REVIEWS

Read independent SelectScience reviews on HALO® and learn how these customers are using Indica Labs’ solutions to streamline their workflows.

Read full reviews or write your own

Halo is the simply the best whole-slide analysis software available.

"Halo is simply the best whole-slide analysis software available. We have a large core facility, scanning over 15,000 brightfield and 2,000 fluorescence slides per year (plus many confocal microscopes, etc.). For whole-slide analysis, we formerly used Genie (from Aperio), and InForm (from Perkin Elmer), and we have collaborators using Definiens (no longer available) and Visiopharm. But now we have over 50 users per month working on Halo and the other platforms have been virtually shut down. Halo is very easy to get up and running - within a 2 hour session we can get a new user started with their own classification and cell counting application. Most users run a batch analysis overnight and collect and review their results in the morning. The team at Indica Labs are quick to respond when we have a challenging analysis project - they will WebEx in and help optimize the parameters. They have the experience (and courage) to tell us if the staining is just not suitable or a more complex classifier is required."

James Jonkman
University Health Network, Advanced Optical Microscopy Facility

Excellent tool, fast, user friendly, powerful

"I am almost completely satisfied with the HALO image analysis platform. The main areas of improvement would be in cell segmentation using membrane markers and in data analysis after datafication of the slide. My principle bottleneck is in creating actionable insight from the multiple reported parameters. I think that Indica's experience with AI and multiplex data generation positions you well to exploit the current need in the marketplace. One more thing - phenotyping manually by thresholding with no morphology/cell size, neighbor information is good but if I had a magic wand, then phenotyping would be a full suite of tools with spatial, multimarker, and morphological features that could be weighted from 0 to 1 in a machine learning classifier model."

Michael Surace
AstraZeneca

For the Pathologist HALO is by far the best digital image analysis platform available

"As a Pathologist specializing in digital image analysis, I have had the opportunity to use several different digital image analysis platforms. Indica Labs' HALO is by far the most accurate, versatile and user friendly digital image analysis platform that I have used. Literally within 10-15 minutes of "tuning" one of their "out of the box" detection algorithms, I can perform image analysis for most simple immunohistochemical markers. The workflow is simple, with sacanned images being imported directly into HALO with or without annotations for analysis. This even allows for remote use when working off site. The customer support is AMAZING and I routinely get same day or next day help from the technical support reps. HALO is a must have for any pathologist or scientist involved in quantifying immunohistochemical stains. In addition the HALO AI module is extremely easy to use. Within 20 minutes I was able to set up AI detection of tumor vs. normal tissue, as well as tumor epithelium vs. stroma. HALO provides everything one needs for quantification of IHC for clinical and pre-clinical studies (of course with supervision of a pathologist). Best of all: it is fun, like a video game for Pathologists!"

Philip Martin
AstraZeneca

Stellar support team and next level research capabilities

"The HALO Image Analysis Platform is a complete game changer in research. Being able to analyze our digitalized tissue slides and TMA slides in order to extract cell counts & cell types based on Immunohistochemistry (IHC) & In situ hybridization (ISH; CISH & FISH) staining allows us to better & more reliably determine the effectiveness of drugs as well as further understand diseases & disease progression. Getting good at using HALO takes training, practice and WebEx assistance from Indica Labs, but once you're up an running, there's no stopping the possibilities. Pairing up this revolutionary technology with a stellar service from the Indica Labs support team that has provided us guidance, usage ideas as well as listening to the customers requests with regards to the regular software updates, makes this platform near unbeatable."

Spencer Revill
Molecular Phenotyping & Imaging Core (MPIC) Facility

We use HALO & HALO-Link daily to coordinate studies for our analysts and pathologists

"HALO is a whole-slide image analysis platform that is designed to work how pathologists classify & score images using a microscope. It uses a set of tools that are very familiar to anyone who has used any type of image viewing/editing program at home. It can be learned in a day to analyze brightfield & fluorescent whole slide images and TMAs. There are sophisticated tools to analyze tissues labeled by chromogenic and fluorescent IHC, RNAScope, FISH & ISH. HALO may be installed on stand-alone workstations or cloud services such as AWS. File sharing through HALO-Link lets user access studies through a simple web-interface sharing a common database. HALO AI allows any user to developing sophisticated AI based tissue classification without the need for external programs or expensive computing hardware."

Timothy Baradet
Bristol-Myers Squibb

Amazing software and service.

"Indica labs is of great support when using Halo. Their customer service is really great. Halo is a very user friendly software, but the technical support is also what makes it the best digital pathology software on the market. they are always open to any suggestion and the response time is usually very short."

Camille Britton-Rivet
Immunocore

Highly recommend

"I work mostly with multiplex immunohistochemistry images evaluating the tumor microenvironment with a focus on tumor infiltration and cell-cell interactions. I've used several image analysis softwares over the years, but I continue to use HALO because it is easy to use yet very powerful. I started using HALO back when Indica Labs was a much smaller company and before they launched HALO Link (which I also like). Although they've grown substantially, they continue to try to provide great customer service and are always working to improve their product. No technology is perfect, but they appear to be passionate about getting past the hurdles of image analysis and to expand the functionality of the software while keeping the learning curve reasonable

Kimberly Smythe
Fred Hutch CRC

LATEST NEWS

Catch up on the latest press releases, event announcements and other news from Indica Labs.

ABOUT INDICA LABS
Indica Labs is the world’s leading provider of computational pathology software and services. Our flagship HALO® image analysis platform enables fast, quantitative evaluation of tissues using a broad range of artificial intelligence (AI) and computer vision algorithms. HALO Link™ and HALO AP® facilitate remote image analysis, collaboration and management. Through a combination of precision, performance, scalability, and usability our software solutions enable pharmaceutical companies, diagnostic labs, research organizations, and Indica’s own contract pharma services team to advance tissue-based research, clinical trials, and diagnostics.

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